MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,289
rRNA: 17
tRNA: 64
tmRNA: 1
Total number of protein coding genes annotated/found:
2,252
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000035.1
MBF0713091.1
Genome Viewer
NA
AA
585/195
1978-1394
hypothetical protein
SEQF5007|JADGMA010000034.1
MBF0713090.1
Genome Viewer
NA
AA
87/29
46191-46105
competence protein ComK
SEQF5007|JADGMA010000034.1
MBF0713089.1
Genome Viewer
NA
AA
444/148
45675-46118
hypothetical protein
SEQF5007|JADGMA010000034.1
MBF0713088.1
Genome Viewer
NA
AA
714/238
44806-45519
transaldolase
SEQF5007|JADGMA010000034.1
MBF0713087.1
Genome Viewer
NA
AA
309/103
44513-44205
hypothetical protein
SEQF5007|JADGMA010000034.1
MBF0713086.1
Genome Viewer
NA
AA
363/121
44149-43787
fluoride efflux transporter CrcB
SEQF5007|JADGMA010000034.1
MBF0713085.1
Genome Viewer
NA
AA
357/119
43790-43434
CrcB family protein
SEQF5007|JADGMA010000034.1
MBF0713084.1
Genome Viewer
NA
AA
840/280
42517-43356
aldo/keto reductase
SEQF5007|JADGMA010000034.1
MBF0713083.1
Genome Viewer
NA
AA
909/303
41453-42361
NERD domain-containing protein
SEQF5007|JADGMA010000034.1
MBF0713082.1
Genome Viewer
NA
AA
1194/398
40149-41342
methionine adenosyltransferase
SEQF5007|JADGMA010000034.1
MBF0713081.1
Genome Viewer
NA
AA
1593/531
39773-38181
phosphoenolpyruvate carboxykinase (ATP)
SEQF5007|JADGMA010000034.1
MBF0713080.1
Genome Viewer
NA
AA
786/262
37318-38103
S9 family peptidase
SEQF5007|JADGMA010000034.1
MBF0713079.1
Genome Viewer
NA
AA
474/158
36864-37337
nucleoside triphosphatase YtkD
SEQF5007|JADGMA010000034.1
MBF0713078.1
Genome Viewer
NA
AA
249/83
36793-36545
membrane protein insertion efficiency factor YidD
SEQF5007|JADGMA010000034.1
MBF0713077.1
Genome Viewer
NA
AA
1002/334
35547-36548
o-succinylbenzoate synthase
SEQF5007|JADGMA010000034.1
MBF0713076.1
Genome Viewer
NA
AA
1404/468
34147-35550
o-succinylbenzoate--CoA ligase
SEQF5007|JADGMA010000034.1
MBF0713075.1
Genome Viewer
NA
AA
555/185
31943-32497
serine hydrolase family protein
SEQF5007|JADGMA010000034.1
MBF0713074.1
Genome Viewer
NA
AA
1395/465
30400-31794
protoporphyrinogen oxidase
SEQF5007|JADGMA010000034.1
MBF0713073.1
Genome Viewer
NA
AA
924/308
29335-30258
ferrochelatase
SEQF5007|JADGMA010000034.1
MBF0713072.1
Genome Viewer
NA
AA
1035/345
28225-29259
uroporphyrinogen decarboxylase
Items 1 - 20
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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